BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A10LP1|AL428317
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig487 983 0.0
3x_Contig1596 167 4e-41
>3x_Contig487
Length = 1564
Score = 983 bits (495), Expect = 0.0
Identities = 528/540 (97%)
Strand = Plus / Plus
Query: 1 agtnagagagcttcaaaactcagaatggtttcaaactaaaagctgattccagcttccgga 60
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agtaagaaagcttcaaaactcagaatggtttcaaactaaaagctgattccagcttccgga 672
Query: 61 aagatatcaaaagggaaagaaaacagagaaaagaaaaaaggacggcgataattggtttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aagatatcaaaagggaaagaaaacagagaaaagaaaaaaggacggcgataattggtttgc 732
Query: 121 caaacttgtttagatcaaatcttccactggaatgcctcgtccaatgtctttctcaccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 caaacttgtttagatcaaatcttccactggaatgcctcgtccaatgtctttctcaccgct 792
Query: 181 gactctgtatcttcctggttgcctttgttcaccgaaattgaataagccggaaaaaatacc 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 793 gactctgtatcttcctggttgcctttgttcaccgaaattgaataagcaggaaaaaatacc 852
Query: 241 ctgatttctgcactagaaacaaacgcttttttggcaaatctaaatcgacgtacaatagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ctgatttctgcactagaaacaaacgcttttttggcaaatctaaatcgacgtacaatagga 912
Query: 301 aagattatcctactcacagacctactgattcactcacgcagkactcaacggcgtatggct 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 913 aagattatcctactcacagacctactgattcactcacgcaggactcaacggcgtatggct 972
Query: 361 tttctatagaagaagcagctggcgttttagaacggtttgctagtgtatctgatgggcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 tttctatagaagaagcagctggcgttttagaacggtttgctagtgtatctgatgggcctt 1032
Query: 421 gcgatgagatggagccacgtttgacgatggaaagacaagtatcagaactgagaagaaggc 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 gcgatgagatggagcaacgtttgacgatggaaagacaagtatcagaactgagaagaaggc 1092
Query: 481 gaattcctttaattttccaactttcgtgcttgaattcttgttttttttcccaacttcacc 540
||||||||||||||||||||||||||| ||| ||||||| || || ||||||||||||
Sbjct: 1093 gaattcctttaattttccaactttcgttctttaattctttttattccacccaacttcacc 1152
>3x_Contig1596
Length = 11686
Score = 167 bits (84), Expect = 4e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 811 ccctggatggaaaaacgaaaaggaagtcatttgtggggggtatggctttggcatcgtgaa 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 ccctggatggaaaaacgaaaaggaagtcatttgtggggggtatggctttggcatcgtgaa 88
Query: 871 atagggatcttcatttacccaccc 894
||||||||||||||||||||||||
Sbjct: 89 atagggatcttcatttacccaccc 112
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7283
Number of Sequences: 1807
Number of extensions: 7283
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)